STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
HGDHomogentisate 1,2-dioxygenase. (445 aa)    
Predicted Functional Partners:
HPD
4-hydroxyphenylpyruvate dioxygenase.
  
 0.998
GSTZ1
Glutathione S-transferase zeta 1.
 
 
 0.993
HPDL
4-hydroxyphenylpyruvate dioxygenase like.
  
 0.990
ENSODEP00000023215
annotation not available
  
 0.976
FAH
Fumarylacetoacetate hydrolase.
  
 
 0.950
PAH
Phenylalanine hydroxylase.
  
  
 0.894
FAHD2A
Fumarylacetoacetate hydrolase domain containing 2A.
  
 
 0.883
FAHD1
Fumarylacetoacetate hydrolase domain containing 1.
  
 
 0.883
AGXT2
Alanine--glyoxylate aminotransferase 2.
   
  
 0.874
TPH2
Tryptophan hydroxylase 2.
  
  
 0.853
Your Current Organism:
Octodon degus
NCBI taxonomy Id: 10160
Other names: O. degus, degu
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.