Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
ALX3 | FERD3L | ENSODEP00000006039 | ENSODEP00000026078 | ALX homeobox 3. | Fer3 like bHLH transcription factor. | 0.678 |
ALX3 | GATA2 | ENSODEP00000006039 | ENSODEP00000003775 | ALX homeobox 3. | GATA binding protein 2. | 0.677 |
ALX3 | GATA3 | ENSODEP00000006039 | ENSODEP00000005770 | ALX homeobox 3. | GATA binding protein 3. | 0.677 |
ALX3 | LDB1 | ENSODEP00000006039 | ENSODEP00000012252 | ALX homeobox 3. | LIM domain binding 1. | 0.932 |
ALX3 | LDB2 | ENSODEP00000006039 | ENSODEP00000013986 | ALX homeobox 3. | LIM domain binding 2. | 0.932 |
ALX3 | LHX3 | ENSODEP00000006039 | ENSODEP00000021940 | ALX homeobox 3. | LIM homeobox 3. | 0.959 |
ALX3 | LHX4 | ENSODEP00000006039 | ENSODEP00000003896 | ALX homeobox 3. | LIM homeobox 4. | 0.959 |
ALX3 | PTF1A | ENSODEP00000006039 | ENSODEP00000002952 | ALX homeobox 3. | Pancreas associated transcription factor 1a. | 0.671 |
ALX3 | SRF | ENSODEP00000006039 | ENSODEP00000021973 | ALX homeobox 3. | Serum response factor. | 0.733 |
ALX3 | TMEM262 | ENSODEP00000006039 | ENSODEP00000019774 | ALX homeobox 3. | Transmembrane protein 262. | 0.717 |
FERD3L | ALX3 | ENSODEP00000026078 | ENSODEP00000006039 | Fer3 like bHLH transcription factor. | ALX homeobox 3. | 0.678 |
FERD3L | GATA2 | ENSODEP00000026078 | ENSODEP00000003775 | Fer3 like bHLH transcription factor. | GATA binding protein 2. | 0.602 |
FERD3L | GATA3 | ENSODEP00000026078 | ENSODEP00000005770 | Fer3 like bHLH transcription factor. | GATA binding protein 3. | 0.602 |
FERD3L | LDB1 | ENSODEP00000026078 | ENSODEP00000012252 | Fer3 like bHLH transcription factor. | LIM domain binding 1. | 0.803 |
FERD3L | LDB2 | ENSODEP00000026078 | ENSODEP00000013986 | Fer3 like bHLH transcription factor. | LIM domain binding 2. | 0.803 |
GATA2 | ALX3 | ENSODEP00000003775 | ENSODEP00000006039 | GATA binding protein 2. | ALX homeobox 3. | 0.677 |
GATA2 | FERD3L | ENSODEP00000003775 | ENSODEP00000026078 | GATA binding protein 2. | Fer3 like bHLH transcription factor. | 0.602 |
GATA2 | GATA3 | ENSODEP00000003775 | ENSODEP00000005770 | GATA binding protein 2. | GATA binding protein 3. | 0.593 |
GATA2 | LDB1 | ENSODEP00000003775 | ENSODEP00000012252 | GATA binding protein 2. | LIM domain binding 1. | 0.884 |
GATA2 | LDB2 | ENSODEP00000003775 | ENSODEP00000013986 | GATA binding protein 2. | LIM domain binding 2. | 0.884 |
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