STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSODEP00000006059annotation not available (392 aa)    
Predicted Functional Partners:
METAP1
Methionyl aminopeptidase 1.
   
 
 0.926
RPS29
Ribosomal protein S29.
  
 
 0.824
ENSODEP00000025303
annotation not available
  
 
 0.824
ENSODEP00000025884
annotation not available
  
 
 0.824
ENSODEP00000025911
annotation not available
  
 
 0.824
ENSODEP00000026088
annotation not available
  
 
 0.824
ENSODEP00000026519
annotation not available
  
 
 0.824
ENSODEP00000026925
annotation not available
  
 
 0.824
ENSODEP00000000620
annotation not available
  
 
 0.821
Rsad1
annotation not available
  
 
 0.821
Your Current Organism:
Octodon degus
NCBI taxonomy Id: 10160
Other names: O. degus, degu
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.