STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KCTD21Potassium channel tetramerization domain containing 21. (254 aa)    
Predicted Functional Partners:
CUL3
Cullin 3.
    
 0.897
CYB561D1
Cytochrome b561 family member D1.
   
  0.820
CUL1
Cullin 1.
    
 0.720
KCTD2
Potassium channel tetramerization domain containing 2.
    
 
0.700
ENSODEP00000025866
annotation not available
    
 
 0.700
KCTD7
Potassium channel tetramerization domain containing 7.
     
0.696
ENSODEP00000022306
annotation not available
    
 0.689
TFAP2E
Transcription factor AP-2 epsilon.
   
 0.684
TFAP2A
Transcription factor AP-2 alpha.
   
 0.684
ENSODEP00000007730
annotation not available
   
 0.684
Your Current Organism:
Octodon degus
NCBI taxonomy Id: 10160
Other names: O. degus, degu
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.