STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
FADS2Fatty acid desaturase 2. (473 aa)    
Predicted Functional Partners:
SC5D
sterol-C5-desaturase.
  
 
 0.879
MSMO1
Methylsterol monooxygenase 1.
  
 
 0.870
FAXDC2
Fatty acid hydroxylase domain containing 2.
  
 
 0.870
PLA2G4A
Phospholipase A2 group IVA.
     
 0.865
FDX1
Ferredoxin 1.
  
 
 0.854
ENSODEP00000022634
annotation not available
  
 
 0.854
ELOVL2
ELOVL fatty acid elongase 2.
     
 0.849
PLA2G3
Phospholipase A2 group III.
    
 0.847
MRTFA
Myocardin related transcription factor A.
    
 0.843
PLA2G6
Phospholipase A2 group VI.
     
 0.836
Your Current Organism:
Octodon degus
NCBI taxonomy Id: 10160
Other names: O. degus, degu
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.