STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SLCO2B1Solute carrier organic anion transporter family member 2B1. (683 aa)    
Predicted Functional Partners:
EFCAB9
EF-hand calcium binding domain 9.
   
 0.906
ENSODEP00000010644
annotation not available
    
  0.899
TMEM262
Transmembrane protein 262.
    
  0.899
SYNJ2BP-COX16
SYNJ2BP-COX16 readthrough.
    
  0.884
CATSPERG
Cation channel sperm associated auxiliary subunit gamma.
    
 0.849
TMEM238
Transmembrane protein 238.
    
 0.671
SLC16A10
Solute carrier family 16 member 10.
   
 
 0.564
SLC22A5
Solute carrier family 22 member 5.
   
  
 0.561
SLC22A2
Solute carrier family 22 member 2.
   
  
 0.535
SLC16A2
Solute carrier family 16 member 2.
   
 
 0.525
Your Current Organism:
Octodon degus
NCBI taxonomy Id: 10160
Other names: O. degus, degu
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.