STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSODEP00000006396annotation not available (72 aa)    
Predicted Functional Partners:
ENSODEP00000000255
annotation not available
   
 0.981
ENSODEP00000025619
annotation not available
   
 0.981
ENSODEP00000010769
annotation not available
   
 0.979
ENSODEP00000026297
annotation not available
   
 0.979
ENSODEP00000018502
annotation not available
   
 0.978
ENSODEP00000024122
annotation not available
   
 0.975
ENSODEP00000025496
annotation not available
   
 0.975
LOC101581379
annotation not available
   
 0.971
COX6A2
Cytochrome c oxidase subunit 6A2, mitochondrial.
   
 0.966
UQCRFS1
Ubiquinol-cytochrome c reductase, Rieske iron-sulfur polypeptide 1.
   
 0.965
Your Current Organism:
Octodon degus
NCBI taxonomy Id: 10160
Other names: O. degus, degu
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.