Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
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Co-occurrence
Co-expression
Experiments
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[Homology]
Score
TTC13Tetratricopeptide repeat domain 13. (845 aa)    
Predicted Functional Partners:
LEO1
LEO1 homolog, Paf1/RNA polymerase II complex component.
    
 0.888
TPGS1
Tubulin polyglutamylase complex subunit 1.
      
 0.885
ENSODEP00000010439
annotation not available
    
 0.865
INTS13
Integrator complex subunit 13.
    
 0.854
BBS7
Bardet-Biedl syndrome 7.
    
 0.849
INTS1
Integrator complex subunit 1.
    
 0.848
TTC8
Tetratricopeptide repeat domain 8.
    
 0.836
INTS11
Integrator complex subunit 11.
  
 0.835
TEP1
Telomerase associated protein 1.
   
 0.822
ENSODEP00000013164
annotation not available
    
  0.819
Your Current Organism:
Octodon degus
NCBI taxonomy Id: 10160
Other names: O. degus, degu
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