STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC101569477Cytochrome c-type heme lyase. (271 aa)    
Predicted Functional Partners:
COX10
Cytochrome c oxidase assembly factor heme A:farnesyltransferase COX10.
   
 
 0.958
FECH
Ferrochelatase.
     
 0.907
HMOX1
Heme oxygenase 1.
     
 0.878
ENSODEP00000001257
annotation not available
     
 0.844
Hmox2
annotation not available
     
 0.844
CYC1
Cytochrome c1.
   
 
 0.786
NDUFA9
NADH:ubiquinone oxidoreductase subunit A9.
   
 
 0.738
CPT2
Carnitine palmitoyltransferase 2.
    
   0.727
ENSODEP00000004339
annotation not available
   
  
 0.703
ENSODEP00000017233
annotation not available
   
  
 0.703
Your Current Organism:
Octodon degus
NCBI taxonomy Id: 10160
Other names: O. degus, degu
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.