STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PSRC1Proline and serine rich coiled-coil 1. (324 aa)    
Predicted Functional Partners:
PRMT2
Protein arginine methyltransferase 2.
   
   0.626
ENSODEP00000022490
annotation not available
   
  
 0.619
ENSODEP00000005019
annotation not available
   
  
 0.590
CDCA8
Cell division cycle associated 8.
   
  
 0.566
SORT1
Sortilin 1.
      
 0.555
CELSR2
Cadherin EGF LAG seven-pass G-type receptor 2.
      
 0.555
ENSODEP00000011772
annotation not available
   
  
 0.537
KIF20B
Kinesin family member 20B.
   
  
 0.534
PIP4K2C
Phosphatidylinositol-5-phosphate 4-kinase type 2 gamma.
      
 0.533
RNF216
Ring finger protein 216.
      
 0.533
Your Current Organism:
Octodon degus
NCBI taxonomy Id: 10160
Other names: O. degus, degu
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.