STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSODEP00000006649annotation not available (221 aa)    
Predicted Functional Partners:
PSMB1
Proteasome 20S subunit beta 1.
   
 0.998
PSMB2
Proteasome 20S subunit beta 2.
   
 0.998
ENSODEP00000017298
annotation not available
    
 0.998
PSMC4
Proteasome 26S subunit, ATPase 4.
  
 0.996
PSMA7
Proteasome 20S subunit alpha 7.
   
0.996
PSMB10
Proteasome 20S subunit beta 10.
   
 0.996
PSMD14
Proteasome 26S subunit, non-ATPase 14.
   
 0.996
PSMB5
Proteasome 20S subunit beta 5.
   
 0.995
PSMD6
Proteasome 26S subunit, non-ATPase 6.
   
 0.995
ENSODEP00000023828
annotation not available
   
 0.995
Your Current Organism:
Octodon degus
NCBI taxonomy Id: 10160
Other names: O. degus, degu
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.