STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSODEP00000006910annotation not available (608 aa)    
Predicted Functional Partners:
COBLL1
Cordon-bleu WH2 repeat protein like 1.
    
 
 0.766
ENSODEP00000001869
annotation not available
    
 0.738
ENSODEP00000002352
annotation not available
    
 0.663
SGIP1
SH3GL interacting endocytic adaptor 1.
    
 0.663
FCHO1
FCH and mu domain containing endocytic adaptor 1.
    
 0.663
PSTPIP1
Proline-serine-threonine phosphatase interacting protein 1.
    
0.663
PSTPIP2
Proline-serine-threonine phosphatase interacting protein 2.
    
 0.663
LCTL
Lactase like.
      
 0.541
ZC3H8
Zinc finger CCCH-type containing 8.
      
 0.532
ANKRD23
Ankyrin repeat domain 23.
    
 
 0.524
Your Current Organism:
Octodon degus
NCBI taxonomy Id: 10160
Other names: O. degus, degu
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.