STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSODEP00000006928annotation not available (505 aa)    
Predicted Functional Partners:
PGM3
Phosphoglucomutase 3.
  
 0.946
ENSODEP00000019901
annotation not available
    
 0.936
GALT
Galactose-1-phosphate uridylyltransferase.
    
 0.936
GNE
Glucosamine (UDP-N-acetyl)-2-epimerase/N-acetylmannosamine kinase.
     
 0.877
GALE
UDP-galactose-4-epimerase.
    
 0.849
PGM5
Phosphoglucomutase 5.
   
 0.842
PGM1
Phosphoglucomutase 1.
   
 0.842
UXS1
UDP-glucuronate decarboxylase 1.
  
 
 0.823
ENSODEP00000001675
annotation not available
 
 0.815
Pgm2
annotation not available
 
 0.815
Your Current Organism:
Octodon degus
NCBI taxonomy Id: 10160
Other names: O. degus, degu
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.