STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSODEP00000006962annotation not available (121 aa)    
Predicted Functional Partners:
BRPF1
Bromodomain and PHD finger containing 1.
    
 0.985
BRD1
Bromodomain containing 1.
   
 0.984
KAT7
Lysine acetyltransferase 7.
 
  
 0.984
DMAP1
DNA methyltransferase 1 associated protein 1.
   
 0.982
TRRAP
Transformation/transcription domain associated protein.
   
 0.982
MSL1
MSL complex subunit 1.
    
 0.978
RUVBL1
RuvB like AAA ATPase 1.
   
 0.976
Brpf3
Bromodomain and PHD finger containing 3.
   
 0.976
ENSODEP00000022772
annotation not available
   
 0.976
MSL2
MSL complex subunit 2.
   
 0.974
Your Current Organism:
Octodon degus
NCBI taxonomy Id: 10160
Other names: O. degus, degu
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.