STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSODEP00000007021annotation not available (277 aa)    
Predicted Functional Partners:
XIAP
X-linked inhibitor of apoptosis.
   
 0.994
APAF1
Apoptotic peptidase activating factor 1.
    
 0.992
PARP1
poly(ADP-ribose) polymerase 1.
    
 0.990
ENSODEP00000022459
annotation not available
 
  
 0.986
CASP8
Caspase 8.
   
0.983
CDKN1A
Cyclin dependent kinase inhibitor 1A.
    
 0.981
CENPN
Centromere protein N.
   
 0.975
BIRC7
Baculoviral IAP repeat containing 7.
   
 0.965
CASP6
Caspase 6.
    
0.965
CENPQ
Centromere protein Q.
   
 0.965
Your Current Organism:
Octodon degus
NCBI taxonomy Id: 10160
Other names: O. degus, degu
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.