STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSODEP00000007142annotation not available (204 aa)    
Predicted Functional Partners:
ENSODEP00000006187
annotation not available
   
 0.988
ENSODEP00000008349
annotation not available
   
 0.987
ENSODEP00000000788
annotation not available
   
 0.983
ENSODEP00000005125
annotation not available
   
 0.972
THBS1
Thrombospondin 1.
   
 
 0.955
THBS2
Thrombospondin 2.
   
 
 0.946
THBS4
Thrombospondin 4.
   
 
 0.930
THBS3
Thrombospondin 3.
   
 
 0.916
COMP
Cartilage oligomeric matrix protein.
   
 
 0.873
ENSODEP00000005624
annotation not available
   
 0.859
Your Current Organism:
Octodon degus
NCBI taxonomy Id: 10160
Other names: O. degus, degu
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.