STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SLC6A7Solute carrier family 6 member 7. (636 aa)    
Predicted Functional Partners:
SLC1A7
Solute carrier family 1 member 7.
    
 0.929
SLC1A6
Solute carrier family 1 member 6.
    
 0.929
SLC1A1
Solute carrier family 1 member 1.
    
 0.926
SLC1A3
Solute carrier family 1 member 3.
    
 0.924
SLC6A1
Solute carrier family 6 member 1.
  
 
 
0.918
SLC6A13
Solute carrier family 6 member 13.
  
 
 
0.908
SLC6A12
Solute carrier family 6 member 12.
  
 
 
0.908
SLC6A2
Solute carrier family 6 member 2.
  
  
 
0.906
SLC6A3
Solute carrier family 6 member 3.
  
  
 
0.906
SLC1A2
Solute carrier family 1 member 2.
  
 
 0.859
Your Current Organism:
Octodon degus
NCBI taxonomy Id: 10160
Other names: O. degus, degu
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.