STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
URB2URB2 ribosome biogenesis homolog. (1510 aa)    
Predicted Functional Partners:
ENSODEP00000007138
annotation not available
  
 0.967
ENSODEP00000007189
annotation not available
  
 0.967
ENSODEP00000025035
annotation not available
  
 0.951
SUCLG1
succinate-CoA ligase alpha subunit.
  
 0.926
ACLY
ATP citrate lyase.
  
 0.915
ENSODEP00000000930
annotation not available
  
 0.914
ENSODEP00000017798
annotation not available
  
 0.914
GOT1L1
Glutamic-oxaloacetic transaminase 1 like 1.
   
 0.902
GOT1
Glutamic-oxaloacetic transaminase 1.
   
 0.902
ENSODEP00000016572
annotation not available
   
 0.896
Your Current Organism:
Octodon degus
NCBI taxonomy Id: 10160
Other names: O. degus, degu
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.