STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSODEP00000007760annotation not available (76 aa)    
Predicted Functional Partners:
ENSODEP00000011466
annotation not available
    
 0.960
ENSODEP00000026765
annotation not available
    
 0.960
ENSODEP00000026828
annotation not available
    
 0.960
ENSODEP00000025653
annotation not available
    
 0.954
ENSODEP00000000168
annotation not available
    
 0.935
PRELID3A
PRELI domain containing 3A.
    
 0.935
ENSODEP00000025624
annotation not available
    
 0.935
ENSODEP00000025744
annotation not available
    
 0.935
ENSODEP00000025880
annotation not available
    
 0.935
PUM1
Pumilio RNA binding family member 1.
    
   0.730
Your Current Organism:
Octodon degus
NCBI taxonomy Id: 10160
Other names: O. degus, degu
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.