STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PKN2Protein kinase N2. (653 aa)    
Predicted Functional Partners:
PDPK1
3-phosphoinositide dependent protein kinase 1.
 
  
 0.985
ENSODEP00000001281
annotation not available
    
 0.929
ENSODEP00000008603
annotation not available
    
 0.929
ENSODEP00000013252
annotation not available
    
 0.929
LOC101580678
annotation not available
    
 0.929
ENSODEP00000026256
annotation not available
    
 0.929
ENSODEP00000011073
annotation not available
    
 0.918
ENSODEP00000011555
annotation not available
    
 0.918
Rhoc
Ras homolog family member C.
    
 0.918
RHOB
Ras homolog family member B.
    
 0.912
Your Current Organism:
Octodon degus
NCBI taxonomy Id: 10160
Other names: O. degus, degu
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.