STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSODEP00000008260annotation not available (270 aa)    
Predicted Functional Partners:
HSD17B12
Hydroxysteroid 17-beta dehydrogenase 12.
   
 0.870
FADS1
Fatty acid desaturase 1.
   
 
 0.867
HACD1
3-hydroxyacyl-CoA dehydratase 1.
    
 0.852
ELOVL3
ELOVL fatty acid elongase 3.
     
 0.847
HACD3
3-hydroxyacyl-CoA dehydratase 3.
   
 0.843
HACD4
3-hydroxyacyl-CoA dehydratase 4.
    
 0.837
HSD17B3
Hydroxysteroid 17-beta dehydrogenase 3.
   
 0.830
ENSODEP00000007383
annotation not available
    
 0.821
ENSODEP00000011961
annotation not available
    
 0.821
ENSODEP00000026222
annotation not available
    
 0.821
Your Current Organism:
Octodon degus
NCBI taxonomy Id: 10160
Other names: O. degus, degu
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.