STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
RALGAPA1Ral GTPase activating protein catalytic alpha subunit 1. (2036 aa)    
Predicted Functional Partners:
RALGAPB
Ral GTPase activating protein non-catalytic beta subunit.
   
 0.877
NKIRAS1
NFKB inhibitor interacting Ras like 1.
    
 
 0.828
NKIRAS2
NFKB inhibitor interacting Ras like 2.
    
 
 0.828
GFOD1
Glucose-fructose oxidoreductase domain containing 1.
    
   0.760
FAM91A1
Family with sequence similarity 91 member A1.
     
 0.757
RHOH
Ras homolog family member H.
    
 0.745
AFDN
Afadin, adherens junction formation factor.
    
 0.737
RHOQ
Ras homolog family member Q.
    
 0.735
RHOJ
Ras homolog family member J.
    
 0.735
RALA
RAS like proto-oncogene A.
    
 0.731
Your Current Organism:
Octodon degus
NCBI taxonomy Id: 10160
Other names: O. degus, degu
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.