STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AGR2Anterior gradient 2, protein disulphide isomerase family member. (176 aa)    
Predicted Functional Partners:
LYPD3
LY6/PLAUR domain containing 3.
    
 
 0.715
FABP2
Fatty acid binding protein 2.
    
 
 0.707
DAG1
Dystroglycan 1.
    
 
 0.661
SPDEF
SAM pointed domain containing ETS transcription factor.
   
  
 0.646
FOXA1
Forkhead box A1.
   
 
 0.635
P4HB
Prolyl 4-hydroxylase subunit beta.
    
 
 0.610
PDIA3
Protein disulfide isomerase family A member 3.
    
 
 0.610
PDIA2
Protein disulfide isomerase family A member 2.
    
 
 0.608
PDIA4
Protein disulfide isomerase family A member 4.
    
 
 0.578
BCAP31
B cell receptor associated protein 31.
    
 
 0.572
Your Current Organism:
Octodon degus
NCBI taxonomy Id: 10160
Other names: O. degus, degu
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.