STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
USP12Ubiquitin specific peptidase 12. (367 aa)    
Predicted Functional Partners:
WDR48
WD repeat domain 48.
    
 0.995
WDR20
WD repeat domain 20.
    
 0.980
ENSODEP00000007667
annotation not available
    
 0.980
DMWD
DM1 locus, WD repeat containing.
    
 0.980
FANCD2
FA complementation group D2.
    
 0.948
ENSODEP00000006216
annotation not available
    
 0.937
ENSODEP00000012954
annotation not available
    
 0.937
Rps27a
annotation not available
    
 0.937
FANCI
FA complementation group I.
    
 0.937
ENSODEP00000026236
annotation not available
    
 0.937
Your Current Organism:
Octodon degus
NCBI taxonomy Id: 10160
Other names: O. degus, degu
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.