STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Adhfe1Alcohol dehydrogenase iron containing 1. (467 aa)    
Predicted Functional Partners:
MRTFA
Myocardin related transcription factor A.
  
 0.996
ENSODEP00000002733
annotation not available
  
 0.987
ENSODEP00000005324
annotation not available
  
 0.987
ADH7
Alcohol dehydrogenase 7 (class IV), mu or sigma polypeptide.
  
 0.987
ENSODEP00000006517
annotation not available
  
 0.987
ENSODEP00000006576
annotation not available
  
 0.987
ENSODEP00000011531
annotation not available
  
 0.987
ENSODEP00000000474
annotation not available
  
 0.954
ENSODEP00000001739
annotation not available
  
 0.954
PC
Pyruvate carboxylase.
  
 0.938
Your Current Organism:
Octodon degus
NCBI taxonomy Id: 10160
Other names: O. degus, degu
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.