STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
DMP1Dentin matrix acidic phosphoprotein 1. (473 aa)    
Predicted Functional Partners:
CDC73
Cell division cycle 73.
    
 0.933
RTF1
RTF1 homolog, Paf1/RNA polymerase II complex component.
    
 0.933
ENSODEP00000022849
annotation not available
    
 0.932
CINP
Cyclin dependent kinase 2 interacting protein.
    
 0.896
CTR9
CTR9 homolog, Paf1/RNA polymerase II complex component.
    
 0.896
SUPT5H
SPT5 homolog, DSIF elongation factor subunit.
    
 0.878
SUPT16H
SPT16 homolog, facilitates chromatin remodeling subunit.
    
 0.866
SUPT4H1
SPT4 homolog, DSIF elongation factor subunit.
    
 0.864
SUPT6H
SPT6 homolog, histone chaperone and transcription elongation factor.
    
 0.862
ENSODEP00000015307
annotation not available
    
 0.861
Your Current Organism:
Octodon degus
NCBI taxonomy Id: 10160
Other names: O. degus, degu
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.