RNF26 protein (Octodon degus) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

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colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:

Neighborhood

Gene Fusion

Cooccurrence

Coexpression

Experiments

Databases

Textmining

[Homology]

Score

RNF26

Ring finger protein 26. (428 aa)

Predicted Functional Partners:

ENSODEP00000001071

0.647

ENSODEP00000003736

0.647

ENSODEP00000007578

0.647

ENSODEP00000009481

0.647

ENSODEP00000018681

0.647

TMEM33

0.616

TRIM26

0.597

FOXN4

0.591

UPK2

0.591

ENSODEP00000002077

0.559

Your Current Organism:

Octodon degus

NCBI taxonomy Id: 10160
Other names: O. degus, degu

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... protein annotations:

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a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

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a tab-delimited file containing all known functional terms of protiens in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
ENSODEP00000001071	RNF26	ENSODEP00000001071	ENSODEP00000009608	annotation not available	Ring finger protein 26.	0.647
ENSODEP00000002077	RNF26	ENSODEP00000002077	ENSODEP00000009608	annotation not available	Ring finger protein 26.	0.559
ENSODEP00000002077	TMEM33	ENSODEP00000002077	ENSODEP00000003928	annotation not available	Transmembrane protein 33.	0.497
ENSODEP00000003736	RNF26	ENSODEP00000003736	ENSODEP00000009608	annotation not available	Ring finger protein 26.	0.647
ENSODEP00000007578	RNF26	ENSODEP00000007578	ENSODEP00000009608	annotation not available	Ring finger protein 26.	0.647
ENSODEP00000009481	RNF26	ENSODEP00000009481	ENSODEP00000009608	annotation not available	Ring finger protein 26.	0.647
ENSODEP00000018681	RNF26	ENSODEP00000018681	ENSODEP00000009608	annotation not available	Ring finger protein 26.	0.647
FOXN4	RNF26	ENSODEP00000009593	ENSODEP00000009608	Forkhead box N4.	Ring finger protein 26.	0.591
FOXN4	UPK2	ENSODEP00000009593	ENSODEP00000010432	Forkhead box N4.	Uroplakin 2.	0.477
RNF26	ENSODEP00000001071	ENSODEP00000009608	ENSODEP00000001071	Ring finger protein 26.	annotation not available	0.647
RNF26	ENSODEP00000002077	ENSODEP00000009608	ENSODEP00000002077	Ring finger protein 26.	annotation not available	0.559
RNF26	ENSODEP00000003736	ENSODEP00000009608	ENSODEP00000003736	Ring finger protein 26.	annotation not available	0.647
RNF26	ENSODEP00000007578	ENSODEP00000009608	ENSODEP00000007578	Ring finger protein 26.	annotation not available	0.647
RNF26	ENSODEP00000009481	ENSODEP00000009608	ENSODEP00000009481	Ring finger protein 26.	annotation not available	0.647
RNF26	ENSODEP00000018681	ENSODEP00000009608	ENSODEP00000018681	Ring finger protein 26.	annotation not available	0.647
RNF26	FOXN4	ENSODEP00000009608	ENSODEP00000009593	Ring finger protein 26.	Forkhead box N4.	0.591
RNF26	TMEM33	ENSODEP00000009608	ENSODEP00000003928	Ring finger protein 26.	Transmembrane protein 33.	0.616
RNF26	TRIM26	ENSODEP00000009608	ENSODEP00000000493	Ring finger protein 26.	Tripartite motif containing 26.	0.597
RNF26	UPK2	ENSODEP00000009608	ENSODEP00000010432	Ring finger protein 26.	Uroplakin 2.	0.591
TMEM33	ENSODEP00000002077	ENSODEP00000003928	ENSODEP00000002077	Transmembrane protein 33.	annotation not available	0.497