STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ADNPActivity dependent neuroprotector homeobox. (1102 aa)    
Predicted Functional Partners:
Chd4
Chromodomain helicase DNA binding protein 4.
   
 
 0.957
CHD8
Chromodomain helicase DNA binding protein 8.
   
 
 0.933
BPTF
Bromodomain PHD finger transcription factor.
   
  
 0.879
CHD5
Chromodomain helicase DNA binding protein 5.
   
 
 0.853
CHD3
Chromodomain helicase DNA binding protein 3.
   
 
 0.853
ASH1L
ASH1 like histone lysine methyltransferase.
   
 
 0.828
ENSODEP00000000633
annotation not available
    
 
 0.807
ENSODEP00000023580
annotation not available
    
 
 0.807
ENSODEP00000014010
annotation not available
    
 
 0.794
Cbx5
annotation not available
    
 
 0.794
Your Current Organism:
Octodon degus
NCBI taxonomy Id: 10160
Other names: O. degus, degu
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.