STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSODEP00000009701annotation not available (891 aa)    
Predicted Functional Partners:
RACGAP1
Rac GTPase activating protein 1.
   
 0.998
KIF23
Kinesin family member 23.
   
 0.997
KIF20A
Kinesin family member 20A.
   
 0.986
KIF20B
Kinesin family member 20B.
   
 0.971
CEP55
Centrosomal protein 55.
   
 
 0.926
BUB1
BUB1 mitotic checkpoint serine/threonine kinase.
   
  
 0.916
KIF4A
Kinesin family member 4A.
   
  
 0.914
ENSODEP00000014876
annotation not available
   
 
 0.911
ENSODEP00000006176
annotation not available
   
  
 0.907
PBK
PDZ binding kinase.
   
 
 0.907
Your Current Organism:
Octodon degus
NCBI taxonomy Id: 10160
Other names: O. degus, degu
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.