STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CUEDC2CUE domain containing 2. (285 aa)    
Predicted Functional Partners:
TBP
TATA-box binding protein.
   
   0.855
TBPL2
TATA-box binding protein like 2.
   
   0.781
FZR1
Fizzy and cell division cycle 20 related 1.
    
 
 0.674
ENSODEP00000008804
annotation not available
   
 
 0.613
ENSODEP00000017251
annotation not available
   
 
 0.613
ENSODEP00000022614
annotation not available
   
 
 0.613
C11orf88
Chromosome 11 open reading frame 88.
   
   0.592
ESR1
Estrogen receptor 1.
    
 
 0.582
CDC27
Cell division cycle 27.
    
 
 0.572
ENSODEP00000018472
annotation not available
    
 
 0.570
Your Current Organism:
Octodon degus
NCBI taxonomy Id: 10160
Other names: O. degus, degu
Server load: low (18%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.