STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
NKX2-6NK2 homeobox 6. (286 aa)    
Predicted Functional Partners:
GATA5
GATA binding protein 5.
   
 0.944
GATA6
GATA binding protein 6.
   
 0.944
GATA4
GATA binding protein 4.
   
 0.944
GATA1
GATA binding protein 1.
   
 0.927
TBX5
T-box transcription factor 5.
   
 
 0.918
TBX4
T-box transcription factor 4.
   
 
 0.918
MEF2C
Myocyte enhancer factor 2C.
    
 
 0.869
MEF2D
Myocyte enhancer factor 2D.
    
 
 0.869
MEF2B
Myocyte enhancer factor 2B.
    
 
 0.869
MEF2A
Myocyte enhancer factor 2A.
    
 
 0.869
Your Current Organism:
Octodon degus
NCBI taxonomy Id: 10160
Other names: O. degus, degu
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.