STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
RNF10Ring finger protein 10. (811 aa)    
Predicted Functional Partners:
CDC27
Cell division cycle 27.
    
  0.881
ENSODEP00000010694
annotation not available
   
    0.828
ENSODEP00000026340
annotation not available
   
    0.828
CMBL
Carboxymethylenebutenolidase homolog.
     
 0.826
AARS2
alanyl-tRNA synthetase 2, mitochondrial.
     
 0.765
ENSODEP00000019563
annotation not available
     
 0.762
ENSODEP00000019779
annotation not available
     
 0.762
WRN
WRN RecQ like helicase.
    
 
 0.746
RECQL4
RecQ like helicase 4.
    
 
 0.746
BLM
BLM RecQ like helicase.
    
 
 0.746
Your Current Organism:
Octodon degus
NCBI taxonomy Id: 10160
Other names: O. degus, degu
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.