STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ADAMDEC1ADAM like decysin 1. (470 aa)    
Predicted Functional Partners:
ENSODEP00000009397
annotation not available
    
  0.757
ITGB5
Integrin subunit beta 5.
    
  0.757
LGI1
Leucine rich glioma inactivated 1.
    
 0.742
LGI2
Leucine rich repeat LGI family member 2.
     
 0.659
SH3PXD2B
SH3 and PX domains 2B.
    
 0.657
SH3PXD2A
SH3 and PX domains 2A.
    
 0.657
LRGUK
Leucine rich repeats and guanylate kinase domain containing.
    
  0.654
LGI4
Leucine rich repeat LGI family member 4.
     
 0.648
CDH3
Cadherin 3.
    
  0.644
CDH1
Cadherin-1-like.
    
  0.644
Your Current Organism:
Octodon degus
NCBI taxonomy Id: 10160
Other names: O. degus, degu
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.