STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
MTX2Metaxin 2. (263 aa)    
Predicted Functional Partners:
SAMM50
SAMM50 sorting and assembly machinery component.
   
 0.996
IMMT
Inner membrane mitochondrial protein.
    
 0.989
CHCHD3
Coiled-coil-helix-coiled-coil-helix domain containing 3.
   
 0.987
MTX3
Metaxin 3.
    
0.983
ENSODEP00000015129
annotation not available
    
 0.983
DNAJC11
DnaJ heat shock protein family (Hsp40) member C11.
   
 0.959
APOOL
Apolipoprotein O like.
   
 0.956
APOO
Apolipoprotein O.
   
 0.936
ENSODEP00000025417
annotation not available
     
 0.928
ENSODEP00000025542
annotation not available
     
 0.928
Your Current Organism:
Octodon degus
NCBI taxonomy Id: 10160
Other names: O. degus, degu
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.