STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
TTC7BTetratricopeptide repeat domain 7B. (843 aa)    
Predicted Functional Partners:
ENSODEP00000023057
annotation not available
    
 
 0.977
FAM126A
Family with sequence similarity 126 member A.
    
 
 0.972
EFR3B
EFR3 homolog B.
   
 
 0.934
ENSODEP00000001880
annotation not available
   
 
 0.903
FAM126B
Family with sequence similarity 126 member B.
    
 
 0.880
ENSODEP00000001230
annotation not available
    
   0.618
SACM1L
SAC1 like phosphatidylinositide phosphatase.
    
 
 0.561
PCSK9
Proprotein convertase subtilisin/kexin type 9.
    
 
 0.561
QPCTL
Glutaminyl-peptide cyclotransferase like.
      
 0.555
ENSODEP00000019474
annotation not available
      
 0.555
Your Current Organism:
Octodon degus
NCBI taxonomy Id: 10160
Other names: O. degus, degu
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.