STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSODEP00000011000annotation not available (447 aa)    
Predicted Functional Partners:
SERPINI2
Serpin family I member 2.
 
 
 
 0.929
FAM20B
FAM20B glycosaminoglycan xylosylkinase.
 
 
  0.711
FAM20A
FAM20A golgi associated secretory pathway pseudokinase.
 
 
  0.711
ENSODEP00000011272
annotation not available
   
  0.703
ST6GALNAC5
ST6 N-acetylgalactosaminide alpha-2,6-sialyltransferase 5.
      
 0.531
NPRL2
NPR2 like, GATOR1 complex subunit.
   
    0.516
GRIFIN
Galectin-related inter-fiber protein.
     
 0.491
FAM124A
Family with sequence similarity 124 member A.
   
 
 0.486
PLEKHH3
Pleckstrin homology, MyTH4 and FERM domain containing H3.
      
 0.478
BPIFB2
BPI fold containing family B member 2.
     
 0.468
Your Current Organism:
Octodon degus
NCBI taxonomy Id: 10160
Other names: O. degus, degu
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.