STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSODEP00000011227annotation not available (119 aa)    
Predicted Functional Partners:
Krit1
KRIT1 ankyrin repeat containing.
    
 0.982
RAPGEF4
Rap guanine nucleotide exchange factor 4.
    
 0.977
RASGRP2
RAS guanyl releasing protein 2.
    
 0.973
RAP1GAP
RAP1 GTPase activating protein.
    
 0.969
ENSODEP00000010090
annotation not available
    
 0.966
ENSODEP00000010785
annotation not available
    
 0.966
APBB1IP
Amyloid beta precursor protein binding family B member 1 interacting protein.
    
 0.964
RAPGEF2
Rap guanine nucleotide exchange factor 2.
    
 0.963
RAF1
Raf-1 proto-oncogene, serine/threonine kinase.
  
 0.961
ENSODEP00000010481
annotation not available
    
 0.961
Your Current Organism:
Octodon degus
NCBI taxonomy Id: 10160
Other names: O. degus, degu
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.