STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CBX3Chromobox 3. (183 aa)    
Predicted Functional Partners:
SUV39H2
Suppressor of variegation 3-9 homolog 2.
   
0.948
SUV39H1
Suppressor of variegation 3-9 homolog 1.
   
 0.948
EHMT2
Euchromatic histone lysine methyltransferase 2.
    
 0.941
PCGF6
Polycomb group ring finger 6.
    
 0.931
L3MBTL2
L3MBTL histone methyl-lysine binding protein 2.
    
 0.909
ENSODEP00000018950
annotation not available
    
 0.890
ENSODEP00000019234
annotation not available
    
 0.890
SUZ12
SUZ12 polycomb repressive complex 2 subunit.
    
 0.871
SIRT1
Sirtuin 1.
    
 0.852
ENSODEP00000001576
annotation not available
   
 0.851
Your Current Organism:
Octodon degus
NCBI taxonomy Id: 10160
Other names: O. degus, degu
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.