STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GATA4GATA binding protein 4. (236 aa)    
Predicted Functional Partners:
NKX2-5
NK2 homeobox 5.
   
 0.985
ZFPM2
Zinc finger protein, FOG family member 2.
    
 0.973
SRF
Serum response factor.
    
 0.959
LMO2
LIM domain only 2.
    
 0.951
NKX2-6
NK2 homeobox 6.
   
 0.944
NFATC2
Nuclear factor of activated T cells 2.
    
 0.936
NFATC3
Nuclear factor of activated T cells 3.
    
 0.929
NFATC4
Nuclear factor of activated T cells 4.
     
 0.914
ARID4B
AT-rich interaction domain 4B.
   
 0.909
Arid4a
AT-rich interaction domain 4A.
   
 0.909
Your Current Organism:
Octodon degus
NCBI taxonomy Id: 10160
Other names: O. degus, degu
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.