Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
ACADM | CRYL1 | ENSODEP00000000868 | ENSODEP00000007157 | acyl-CoA dehydrogenase medium chain. | Crystallin lambda 1. | 0.955 |
ACADM | ECHS1 | ENSODEP00000000868 | ENSODEP00000023040 | acyl-CoA dehydrogenase medium chain. | enoyl-CoA hydratase, short chain 1. | 0.977 |
ACADM | ECI1 | ENSODEP00000000868 | ENSODEP00000018768 | acyl-CoA dehydrogenase medium chain. | enoyl-CoA delta isomerase 1. | 0.953 |
ACADM | ECI2 | ENSODEP00000000868 | ENSODEP00000009434 | acyl-CoA dehydrogenase medium chain. | enoyl-CoA delta isomerase 2. | 0.988 |
ACADM | ENSODEP00000007278 | ENSODEP00000000868 | ENSODEP00000007278 | acyl-CoA dehydrogenase medium chain. | annotation not available | 0.947 |
ACADM | HADH | ENSODEP00000000868 | ENSODEP00000015130 | acyl-CoA dehydrogenase medium chain. | hydroxyacyl-CoA dehydrogenase. | 0.987 |
ACADM | HADHA | ENSODEP00000000868 | ENSODEP00000012644 | acyl-CoA dehydrogenase medium chain. | hydroxyacyl-CoA dehydrogenase trifunctional multienzyme complex subunit alpha. | 0.987 |
ACADM | HADHB | ENSODEP00000000868 | ENSODEP00000011559 | acyl-CoA dehydrogenase medium chain. | hydroxyacyl-CoA dehydrogenase trifunctional multienzyme complex subunit beta. | 0.986 |
CRYL1 | ACADM | ENSODEP00000007157 | ENSODEP00000000868 | Crystallin lambda 1. | acyl-CoA dehydrogenase medium chain. | 0.955 |
CRYL1 | ECHS1 | ENSODEP00000007157 | ENSODEP00000023040 | Crystallin lambda 1. | enoyl-CoA hydratase, short chain 1. | 0.940 |
CRYL1 | ECI1 | ENSODEP00000007157 | ENSODEP00000018768 | Crystallin lambda 1. | enoyl-CoA delta isomerase 1. | 0.869 |
CRYL1 | ECI2 | ENSODEP00000007157 | ENSODEP00000009434 | Crystallin lambda 1. | enoyl-CoA delta isomerase 2. | 0.934 |
CRYL1 | ENSODEP00000007278 | ENSODEP00000007157 | ENSODEP00000007278 | Crystallin lambda 1. | annotation not available | 0.911 |
CRYL1 | HADH | ENSODEP00000007157 | ENSODEP00000015130 | Crystallin lambda 1. | hydroxyacyl-CoA dehydrogenase. | 0.854 |
CRYL1 | HADHA | ENSODEP00000007157 | ENSODEP00000012644 | Crystallin lambda 1. | hydroxyacyl-CoA dehydrogenase trifunctional multienzyme complex subunit alpha. | 0.868 |
CRYL1 | HADHB | ENSODEP00000007157 | ENSODEP00000011559 | Crystallin lambda 1. | hydroxyacyl-CoA dehydrogenase trifunctional multienzyme complex subunit beta. | 0.993 |
CRYL1 | HMGCS1 | ENSODEP00000007157 | ENSODEP00000000664 | Crystallin lambda 1. | 3-hydroxy-3-methylglutaryl-CoA synthase 1. | 0.821 |
CRYL1 | HMGCS2 | ENSODEP00000007157 | ENSODEP00000000660 | Crystallin lambda 1. | 3-hydroxy-3-methylglutaryl-CoA synthase 2. | 0.821 |
ECHS1 | ACADM | ENSODEP00000023040 | ENSODEP00000000868 | enoyl-CoA hydratase, short chain 1. | acyl-CoA dehydrogenase medium chain. | 0.977 |
ECHS1 | CRYL1 | ENSODEP00000023040 | ENSODEP00000007157 | enoyl-CoA hydratase, short chain 1. | Crystallin lambda 1. | 0.940 |
page 1 of 6