STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ULK1Unc-51 like autophagy activating kinase 1. (1075 aa)    
Predicted Functional Partners:
ATG14
Autophagy related 14.
    
 0.998
ATG13
Autophagy related 13.
   
 0.998
PIK3R4
Phosphoinositide-3-kinase regulatory subunit 4.
    
 0.997
Rb1cc1
RB1 inducible coiled-coil 1.
    
 0.996
ENSODEP00000004185
annotation not available
    
 0.996
ATG101
Autophagy related 101.
    
 0.996
NRBF2
Nuclear receptor binding factor 2.
    
 0.995
ATG2B
Autophagy related 2B.
   
 0.995
ENSODEP00000024578
annotation not available
    
 0.995
PIK3C3
Phosphatidylinositol 3-kinase catalytic subunit type 3.
    
 0.995
Your Current Organism:
Octodon degus
NCBI taxonomy Id: 10160
Other names: O. degus, degu
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.