STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
TSPAN17Tetraspanin 17. (270 aa)    
Predicted Functional Partners:
ADAM10
ADAM metallopeptidase domain 10.
   
 0.817
MET
MET proto-oncogene, receptor tyrosine kinase.
    
 0.785
ENSODEP00000024866
annotation not available
    
 0.785
CD19
CD19 molecule.
    
 0.745
PDGFB
Platelet derived growth factor subunit B.
    
 0.674
ADAM17
ADAM metallopeptidase domain 17.
    
 0.656
PICK1
Protein interacting with PRKCA 1.
     
 0.621
PTK7
Protein tyrosine kinase 7 (inactive).
    
 0.591
CD9
CD9 molecule.
    
 
0.583
CD68
CD68 molecule.
   
 0.557
Your Current Organism:
Octodon degus
NCBI taxonomy Id: 10160
Other names: O. degus, degu
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.