STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
DEFB135Defensin beta 135. (74 aa)    
Predicted Functional Partners:
DEFB136
Defensin beta 136.
  
  
 0.910
DEFB124
Defensin beta 124.
  
  
 0.864
LOC101562433
annotation not available
  
  
 0.854
ENSODEP00000015239
annotation not available
     
 0.779
DEFB123
Defensin beta 123.
     
 0.759
LOC101587513
annotation not available
     
 0.743
ENSODEP00000016837
annotation not available
     
 0.717
LOC101588300
annotation not available
     
 0.700
DEFB128
Defensin beta 128.
     
 0.680
ENSODEP00000016734
annotation not available
  
  
  0.545
Your Current Organism:
Octodon degus
NCBI taxonomy Id: 10160
Other names: O. degus, degu
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.