STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSODEP00000011834annotation not available (165 aa)    
Predicted Functional Partners:
BRCC3
BRCA1/BRCA2-containing complex subunit 3.
    
 0.998
ENSODEP00000001778
annotation not available
    
 0.998
BABAM2
BRISC and BRCA1 A complex member 2.
    
 0.998
ABRAXAS1
Abraxas 1, BRCA1 A complex subunit.
    
 0.998
ENSODEP00000024612
annotation not available
    
 0.998
ENSODEP00000011039
annotation not available
    
 0.984
ENSODEP00000007615
annotation not available
    
 0.981
RAG2
Recombination activating 2.
   
 0.977
PAXIP1
PAX interacting protein 1.
    
 0.970
ENSODEP00000026177
annotation not available
    
 0.969
Your Current Organism:
Octodon degus
NCBI taxonomy Id: 10160
Other names: O. degus, degu
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.