STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GDF7Growth differentiation factor 7. (444 aa)    
Predicted Functional Partners:
CHRD
Chordin.
    
 0.983
ACVR2A
Activin A receptor type 2A.
    
 0.982
ACVR2B
Activin A receptor type 2B.
    
 0.982
NOG
Noggin.
    
 0.982
BMPR1B
Bone morphogenetic protein receptor type 1B.
    
 0.980
BMPR1A
Bone morphogenetic protein receptor type 1A.
    
 0.977
BMPR2
Bone morphogenetic protein receptor type 2.
    
 0.975
HJV
Hemojuvelin BMP co-receptor.
    
 0.967
RGMB
Repulsive guidance molecule BMP co-receptor b.
    
 0.967
RGMA
Repulsive guidance molecule BMP co-receptor a.
    
 0.967
Your Current Organism:
Octodon degus
NCBI taxonomy Id: 10160
Other names: O. degus, degu
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.