STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
MAIP1Matrix AAA peptidase interacting protein 1. (274 aa)    
Predicted Functional Partners:
SPG7
SPG7 matrix AAA peptidase subunit, paraplegin.
    
 0.913
SMDT1
Single-pass membrane protein with aspartate rich tail 1.
     
 0.852
ENSODEP00000007220
annotation not available
    
 0.761
PHB
Prohibitin.
    
 0.761
ENSODEP00000024115
annotation not available
    
 0.761
ENSODEP00000025015
annotation not available
    
 0.761
ENSODEP00000026795
annotation not available
    
 0.761
ENSODEP00000004072
annotation not available
    
 0.749
ENSODEP00000025666
annotation not available
    
 0.749
AFG3L2
AFG3 like matrix AAA peptidase subunit 2.
    
 0.741
Your Current Organism:
Octodon degus
NCBI taxonomy Id: 10160
Other names: O. degus, degu
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.