STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
RPA1Replication protein A1. (619 aa)    
Predicted Functional Partners:
RPA3
Replication protein A3.
   
 0.999
WRN
WRN RecQ like helicase.
    
 0.999
ENSODEP00000005901
annotation not available
   
 0.998
ENSODEP00000013973
annotation not available
   
 0.998
RAD51
RAD51 recombinase.
  
 0.997
MCM2
Minichromosome maintenance complex component 2.
   
 0.996
HELB
DNA helicase B.
   
 0.996
ENSODEP00000007011
annotation not available
  
 0.996
SMARCAL1
SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a like 1.
    
 0.996
BLM
BLM RecQ like helicase.
   
 0.996
Your Current Organism:
Octodon degus
NCBI taxonomy Id: 10160
Other names: O. degus, degu
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.