STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSODEP00000012190annotation not available (207 aa)    
Predicted Functional Partners:
PLA2G2E
Phospholipase A2 group IIE.
     
 0.893
LPCAT3
Lysophosphatidylcholine acyltransferase 3.
   
 
 0.880
PLAAT3
Phospholipase A and acyltransferase 3.
     
 0.880
PLA2G2F
Phospholipase A2 group IIF.
     
 0.879
PLA2G15
Phospholipase A2 group XV.
     
 0.877
LPCAT4
Lysophosphatidylcholine acyltransferase 4.
  
 
 0.875
LPCAT2
Lysophosphatidylcholine acyltransferase 2.
    
 0.875
PLA2G6
Phospholipase A2 group VI.
    
 0.870
ENSODEP00000000572
annotation not available
    
 0.869
ENSODEP00000007279
annotation not available
    
 0.869
Your Current Organism:
Octodon degus
NCBI taxonomy Id: 10160
Other names: O. degus, degu
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.