STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AOAHAcyloxyacyl hydrolase. (573 aa)    
Predicted Functional Partners:
ARHGAP24
Rho GTPase activating protein 24.
   
  
 0.549
ABHD4
Abhydrolase domain containing 4.
   
  
 0.519
SFTPB
Surfactant protein B.
   
  
 0.464
ENSODEP00000020515
annotation not available
   
  
 0.464
ABHD5
Abhydrolase domain containing 5.
   
  
 0.463
NDUFS3
NADH:ubiquinone oxidoreductase core subunit S3.
   
    0.435
GRN
Granulin precursor.
   
    0.435
Your Current Organism:
Octodon degus
NCBI taxonomy Id: 10160
Other names: O. degus, degu
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.