ENSODEP00000012646 protein (Octodon degus) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:

Neighborhood

Gene Fusion

Cooccurrence

Coexpression

Experiments

Databases

Textmining

[Homology]

Score

ENSODEP00000012646

annotation not available (216 aa)

Predicted Functional Partners:

SLC25A1

0.885

GRN

0.885

LENG1

0.875

ENSODEP00000006787

0.833

ENSODEP00000007138

0.833

ENSODEP00000007189

0.833

ENSODEP00000017188

0.833

ENSODEP00000015423

0.824

ENSODEP00000015548

0.824

CSNK2A2

0.824

Your Current Organism:

Octodon degus

NCBI taxonomy Id: 10160
Other names: O. degus, degu

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structured XML interaction data, according to the 'PSI-MI' data standard

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... protein sequences:

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MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

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a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

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a tab-delimited file containing all known functional terms of protiens in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
CSNK2A2	ENSODEP00000006787	ENSODEP00000022449	ENSODEP00000006787	Casein kinase 2 alpha 2.	annotation not available	0.833
CSNK2A2	ENSODEP00000007138	ENSODEP00000022449	ENSODEP00000007138	Casein kinase 2 alpha 2.	annotation not available	0.839
CSNK2A2	ENSODEP00000007189	ENSODEP00000022449	ENSODEP00000007189	Casein kinase 2 alpha 2.	annotation not available	0.839
CSNK2A2	ENSODEP00000012646	ENSODEP00000022449	ENSODEP00000012646	Casein kinase 2 alpha 2.	annotation not available	0.824
CSNK2A2	ENSODEP00000015423	ENSODEP00000022449	ENSODEP00000015423	Casein kinase 2 alpha 2.	annotation not available	0.983
CSNK2A2	ENSODEP00000015548	ENSODEP00000022449	ENSODEP00000015548	Casein kinase 2 alpha 2.	annotation not available	0.983
CSNK2A2	ENSODEP00000017188	ENSODEP00000022449	ENSODEP00000017188	Casein kinase 2 alpha 2.	annotation not available	0.833
CSNK2A2	GRN	ENSODEP00000022449	ENSODEP00000024619	Casein kinase 2 alpha 2.	Granulin precursor.	0.885
CSNK2A2	LENG1	ENSODEP00000022449	ENSODEP00000000642	Casein kinase 2 alpha 2.	Leukocyte receptor cluster member 1.	0.707
CSNK2A2	SLC25A1	ENSODEP00000022449	ENSODEP00000022474	Casein kinase 2 alpha 2.	Solute carrier family 25 member 1.	0.885
ENSODEP00000006787	CSNK2A2	ENSODEP00000006787	ENSODEP00000022449	annotation not available	Casein kinase 2 alpha 2.	0.833
ENSODEP00000006787	ENSODEP00000007138	ENSODEP00000006787	ENSODEP00000007138	annotation not available	annotation not available	0.855
ENSODEP00000006787	ENSODEP00000007189	ENSODEP00000006787	ENSODEP00000007189	annotation not available	annotation not available	0.855
ENSODEP00000006787	ENSODEP00000012646	ENSODEP00000006787	ENSODEP00000012646	annotation not available	annotation not available	0.833
ENSODEP00000006787	ENSODEP00000015423	ENSODEP00000006787	ENSODEP00000015423	annotation not available	annotation not available	0.833
ENSODEP00000006787	ENSODEP00000015548	ENSODEP00000006787	ENSODEP00000015548	annotation not available	annotation not available	0.833
ENSODEP00000006787	GRN	ENSODEP00000006787	ENSODEP00000024619	annotation not available	Granulin precursor.	0.916
ENSODEP00000006787	LENG1	ENSODEP00000006787	ENSODEP00000000642	annotation not available	Leukocyte receptor cluster member 1.	0.787
ENSODEP00000006787	SLC25A1	ENSODEP00000006787	ENSODEP00000022474	annotation not available	Solute carrier family 25 member 1.	0.922
ENSODEP00000007138	CSNK2A2	ENSODEP00000007138	ENSODEP00000022449	annotation not available	Casein kinase 2 alpha 2.	0.839